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研究方向	发表时间	杂志名	影响因子	文章标题	合作单位
微生物组学	2020	nature microbiology	17.745	Doubling of the known set of RNA viruses by metagenomic analysis of an aquatic virome‍	俄勒冈州立大学&上海海洋大学
	2022	Microbiome	14.65	Long-term efect of epigenetic modifcation in plant–microbe interactions: modifcation of DNA methylation induced by plant growth_x005f_x0002_promoting bacteria mediates promotion process	南京农业大学生命科学学院
	2021	Microbiome	14.65	An integrated gene catalog and over 10,000 metagenome-assembled genomes from the gastrointestinal microbiome of ruminants	南京农业大学动物科技学院
	2020	nature microbiology	14.3	Competition for iron drives phytopathogen control by natural rhizosphere microbiomes‍	南京农业大学
	2021	Water Res	11.236	How environmental stress leads to alternative microbiota states in a river ecosystem: A new insight into river restoration	河海大学
	2021	Water Res	11.236	Microbial community coalescence: does it matter in the Three Gorges Reservoir?	三峡库区
	2020	Chemical Engineering Journal	10.652	Electrochemical behavior of biochar and its effects on microbial nitrate reduc‐ tion: Role of extracellular polymeric substances in extracellular electron transfer‍	河海大学
	2020	Microbiome	10.465	Rhizosphere protists are key determinants of plant health‍	南京农业大学
	2021	Bioresour Technol	9.642	Metagenomic approach reveals the fates and mechanisms of antibiotic resistance genes exposed to allicins during waste activated sludge fermentation: Insight of the microbial community, cellular status and gene regulation	华东师范大学
	2021	Bioresour Technol	9.642	Effects of persulfate treatment on the fates of antibiotic resistance genes in waste activated sludge fermentation process and the underlying mechanism	华东师范大学
	2021	Bioresour Technol	9.641	Ensiling pretreatment with two novel microbial consortia enhances bioethanol production in sterile rice straw	南京农业大学
	2021	Environment International	9.6	Use of biochar to reduce mercury accumulation in Oryza sativa L: A trial for sustainable management of historically polluted farmlands	中国科学院地球化学研究所
	2021	ISME	9.181	Erosion reduces soil microbial diversity, network complexity and multifunctionality‍	西北农林科技大学
	2020	water Research	9.13	Grain size tunes microbial community assembly and nitrogen transformation activity under frequent hyporheic exchange: A column experiment‍	河海大学
	2020	water Research	9.13	New insights into the vertical distribution and microbial degradation of microplastics in urban river sediments‍	河海大学
	2020	water Research	9.13	Dams shift microbial community assembly and imprint nitrogen transformation along the Yangtze River‍	河海大学
	2020	Journal of Hazardous Materials	9.038	Microbe mediated immobilization of arsenic in the rice rhizosphere after incorporation of silica impregnated biochar composites‍	南昆士兰大学
	2020	Journal of Hazardous Materials	9.038	Distinct effects of hypochlorite types on the reduction of antibiotic resistance genes during waste activated sludge fermentation: Insights of bacterial community, cellular activity, and genetic expression‍	华东师范大学
	2021	Journal of Hazardous Materials	9.038	Fe(III) reduction due to low pe+pH contributes to reducing Cd transfer within a soil-rice system	中国农业科学院农业资源与农业区划研究所
	2020	Environ. Sci. Technol.	9.028	Antibiotic Resistance Gene-Carrying Plasmid Spreads into the Plant Endophytic Bacteria using Soil Bacteria as Carriers	南开大学

真核转录组	2022	Microbiome	14.65	Long-term efect of epigenetic modifcation in plant–microbe interactions: modifcation of DNA methylation induced by plant growth_x005f_x0002_promoting bacteria mediates promotion process	南京农业大学生命科学学院
	2021	Bioengineering&translational medicine	10.7106	In-cytoplasm mitochondrial transplantation for mesenchymal stem cells engineering and tissue regeneration	浙江大学＆浙江大学医学院
	2021	J Hazard Mater	10.588	Environmentally relevant concentrations of sertraline disrupts behavior and the brain and liver transcriptome of juvenile yellow catfish (Tachysurus fulvidraco)	南京地理与湖泊研究
	2021	Journal of Controlled Release	9.776	Maintaining manganese in tumor to activate cGAS-STING pathway evokes a robust abscopal anti-tumor effect‍	南京大学医学院
	2021	Journal of Hazardous Materials	9.038	Environmentally relevant concentrations of sertraline disrupts behavior and the brain and liver transcriptome of juvenile yellow catfsh (Tachysurus fulvidraco): Implications for the feeding and growth axis‍	中国科学院南京地理与湖泊研究所
	2021	Journal of Hazardous Materials	9.038	Selenium nanoparticles ameliorate Brassica napus L. cadmium toxicity by inhibiting the respiratory burst and scavenging reactive oxygen species‍	山东大学环境科学与工程学院
	2021	Environ Sci Technol	9.028	Transcriptomic Analysis of Stropharia Rugosoannulata Reveals Potential Carbohydrate Metabolism and Cold Resistance Mechanisms Under Low-Temperature	复旦大学生命科学学院
	2020	Oncogene	7.791	The Wnt/β-catenin/VASP positive feedback loop drives cell proliferation and migration in breast cancer‍	武汉大学基础医学院
	2020	Gut Microbes	7.74	Gut microbiota regulate tumor metastasis via circRNA/miRNA networks‍	同济大学医学院
	2022	Horticulture Research	6.793	An ARF1-binding factor triggering programmed cell death and periderm development in pear russet fruit skin	浙江省农业科学院
	2021	Front Nutr	6.576	Feeding Frequency Modulates the Intestinal Transcriptome Without Affecting the Gut Microbiota in Pigs With the Same Daily Feed Intake	南京农业大学
	2022	Frontiers in Nutrition	6.576	Multi-Omics Landscape of DNA Methylation Regulates Browning in “Fuji” Apple	中国农业科学院
	2021	Stem Cells	6.277	Urine stem cells are equipped to provide B cell survival signals‍	南京农业大学
	2021	COMMUNICATIONS BIOLOGY	6.268	Brassicaceae transcriptomes reveal convergent evolution of super- accumulation of sinigrin	浙江大学
	2021	Bioeng Transl Med	6.091	In‐cytoplasm mitochondrial transplantation for mesenchymal stem cells engineering and tissue regeneration	浙江大学医学院第二附属医院

原核转录组	2020	Journal of Hazardous Materials	9.038	Transcription profiling-guided remodeling of sulfur metabolism in synthetic bacteria for efficiently capturing heavy metals‍	南开大学生命科学学院
	2022	Mlife	8.14	Indole Reverses Intrinsic Antibiotic Resistance by Activating a Novel Dual-Function Importer	中国海洋大学
	2019	mBio	6.747	The toxicity effects of nano/microplastics on an antibiotic producing strain - Streptomyces coelicolor M145	中国海洋大学海洋生命科学学院
	2020	Science of The Total Environment	6.551	Enhanced Activity against Multi-drug Resistant Bacteria through Coapplication of an Analogue of Tachyplesin I and an Inhibitor of the QseC/B Signaling Pathway	南开大学
	2020	Journal of Medicinal Chemistry	6.205	Involvement of a PadR regulator PrhP on virulence of Ralstonia solanacearum by controlling detoxification of phenolic acids and type III secretion system	中国海洋大学
	2021	Front Microbiol	5.64	Traditional Chinese Medicine Tanreqing Inhibits Quorum Sensing Systems in Pseudomonas aeruginosa	中国医学科学院
	2021	Appl Microbiol Biotechnol	4.813	Toxin-antitoxin HicAB regulates the formation of persister cells responsible for the acid stress resistance in Acetobacter pasteurianus	浙江工商大学食品科学与生物技术学院
	2021	Appl Environ Microbiol	4.792	The Plant-Beneficial Rhizobacterium Bacillus velezensis FZB42 Controls the Soybean Pathogen Phytophthora sojae Due to Bacilysin Production	南京林业大学
	2020	Microorganisms	4.167	‍‍Transcriptome Analysis of Ice Plant Growth-Promoting Endophytic Bacterium Halomonas sp. Strain MC1 to Identify the Genes Involved in Salt Tolerance‍	安徽省农业科学院园艺研究所

真菌基因组	2020	ISME	9.493	Population genomics and evolution of a fungal pathogen after releasing exotic strains to control insect pests for 20 years‍	中国科学院植物生理生态研究所
	2021	Genomics	6.205	The completed genome sequence of the pathogenic ascomycete fungus Penicillium digitatum	杭州师范大学生命与环境科学学院
	2020	COMMUNICATIONS BIOLOGY	4.165	Upregulation of a marine fungal biosynthetic gene cluster by an endobacterial symbiont	中国科学院热带海洋生物资源与生态重点实验室
	2022	IMA Fungus	3.515	flack fungi and ants: a genomic comparison of species inhabiting carton nests versus domatia	济宁市第一人民医院
	2020	Mycoses	3.065	Assembly and analysis of the whole genome of Arthroderma uncinatum strain T10, compared with Microsporum canis and Trichophyton rubrum‍	南京皮肤病研究所

细菌基因组	2021	Elife	8.146	A novel ATP dependent dimethylsulfoniopropionate lyase in bacteria that releases dimethyl sulfide and acryloyl-CoA	中国海洋大学
	2021	Microbiol Spectr	7.171	The Second Chromosome Promotes the Adaptation of the Genus Flammeovirga to Complex Environments	山东大学
	2021	Emerging Microbes & Infections	7.163	Increasing prevalence of hypervirulent ST5 methicillin susceptible Staphylococcus aureus subtype poses a serious clinical threat	上海交通大学附属仁济医院
	2020	Chemosphere	5.778	Tetracycline degradation by Klebsiella sp. strain TR5: Proposed degradation pathway and possible genes involved	盐城师范学院
	2021	Mar Drugs	5.118	Identification and Heterologous Expression of the Kendomycin B Biosynthetic Gene Cluster from Verrucosispora sp. SCSIO 07399	中国科学院热带海洋生物资源与生态重点实验室
	2020	The Journal of Infectious Diseases	5.045	Risk Factors and Molecular Epidemiology of Complicated Intra-Abdominal Infections With Carbapenem-Resistant Enterobacteriaceae: A Multicenter Study in China‍	上海交通大学医学院附属瑞金医院北院重症医学科
	2020	Environmental Microbiology	4.933	Comparative genomic analysis of iprodione-degrading Paenarthrobacter strains reveals the iprodione catabolic molecular mechanism in Paenarthrobacter sp. strain YJN-5	南京农业大学
	2021	Environmental Microbiology	4.933	Rapid and highly efficient genomic engineering with a novel iEditing device for programming versatile extracellular electron transfer of electroactive bacteria	中国科学技术大学生命科学学院

病毒基因组	2021	Food Research International	6.475	Isolation, characterization and comparison of lytic Epseptimavirus phages targeting Salmonella‍	大连理工大学生命学院
	2021	Front Microbiol	5.64	A Novel Polyvalent Bacteriophage vB_EcoM_swi3 Infects Pathogenic Escherichia coli and Salmonella enteritidis	青岛农业大学动物医学院
	2020	Microbial biotechnology	5.328	The endolysin of the Acinetobacter baumannii phage vB_AbaP_D2 shows broad antibacterial activity‍	大连理工大学
	2020	Environmental Microbiology	5.147	A newly recorded Rickettsia of the Torix group is a recent intruder and an endosymbiont in the whitefly Bemisia tabaci	浙江大学昆虫科学研究所
	2021	Viruses	5.048	Isolation and Identifification of Type F Bovine Enterovirus from Clinical Cattle with Diarrhoea	南京农业大学兽医学院
	2022	Viruses	5.048	Genetic and Pathogenic Characterization of a New Iridovirus Isolated from Cage-Cultured Large Yellow Croaker (Larimichthys crocea) in China	浙江海洋大学
	2021	Applied and Environmental Microbiology	4.792	Pathogenic Escherichia coli-Specific Bacteriophages and Polyvalent Bacteriophages in Piglet Guts with Increasing Coliphage Numbers after Weaning‍	南京农业大学
	2020	Journal of Virology	4.501	LamB, OmpC and the Core Lipopolysaccharide of Escherichia coli K12 Function as Receptors of Bacteriophage Bp7	青岛农业大学动物医学院
	2021	Aquaculture	3.224	Protective effectiveness of feeding phage cocktails in controlling Vibrio harveyi infection of turbot Scophthalmus maximus‍	大连理工大学

线粒体基因组	2021	Nature Cell Biology	28.824	The memory of neuronal mitochondrial stress is inherited transgenerationally via elevated mitochondrial DNA levels	中国科学院遗传与发育生物学研究所
	2021	Genomics	5.736	Characterization of the complete mitochondrial genome of the many-lined sun skink (Eutropis multifasciata) and comparison with other Scincomorpha species‍	南京师范大学
	2020	Theoretical and Applied Genetics	4.439	Genome‑wide analysis of mRNA and lncRNA expression and mitochondrial genome sequencing provide insights into the mechanisms underlying a novel cytoplasmic male sterility system, BVRC‑CMS96, in Brassica rapa	北京农林科学院蔬菜研究中心
	2022	The Crop Journal	4.407	The cotton mitochondrial chimeric gene orf610a causes male sterility by disturbing the dynamic balance of ATP synthesis and ROS burst	郑州大学
	2021	International Journal of Molecular Sciences	4.183	Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery ( Apium graveolens L.)	中国农业大学
	2021	Genes (Basel)	4.096	Mitochondrial Genomes of the Genus Claassenia (Plecoptera: Perlidae) and Phylogenetic Assignment to Subfamily Perlinae	扬州大学园艺与植物保护学院/应用昆虫研究所
	2021	BMC Genomics	3.969	Comparative analysis of the complete mitochondrial genome sequences and anther development cytology between maintainer and Ogura-type cytoplasm male-sterile cabbage (B. oleracea Var. capitata)	北京市农科院蔬菜研究中心
	2021	Frontiers in Marine Science	3.661	A New Species of the Deep-Sea Sponge-Associated Genus Eiconaxius (Crustacea: Decapoda: Axiidae), With New Insights Into the Distribution, Speciation, and Mitogenomic Phylogeny of Axiidean ShrimpsComparative Analysis of the Mitochondrial Genome Sequences of two Medicinal Plants: Arctium Lappa and A. Tomentosum‍	中国科学院海洋研究所

叶绿体基因组	2021	Front Plant Sci	5.753	Comparative Chloroplast Genomes of Zosteraceae Species Provide Adaptive Evolution Insights Into Seagrass	中国海洋大学
	2021	Front Plant Sci	5.753	Complete Chloroplast Genome Analysis of Two Important Medicinal Alpinia Species: Alpinia galanga and Alpinia kwangsiensis	云南药用植物研究所
	2020	International Journal of Molecular Sciences	4.556	Comparative Analyses of Five Complete Chloroplast Genomes from the Genus Pterocarpus (Fabacaeae)‍	中国林业科学研究院热带林业研究所树木遗传育种国家重点实验室
	2021	BMC Genomics	4.215	The cotton mitochondrial chimeric gene orf610a causes male sterility by disturbing the dynamic balance of ATP synthesis and ROS burst	广东省农业科学院环境园艺研究所
	2020	Molecular Phylogenetics and Evolution	3.992	Evolutionary patterns of plastome uncover diploid-polyploid maternal rela- tionships in Triticeae‍	四川农业大学小麦研究所
	2021	BMC Genomics	3.594	Comparative chloroplast genomes: insights into the evolution of the chloroplast genome of Camellia sinensis and the phylogeny of Camellia‍	五邑大学茶叶与食品科学学院
	2021	BMC Genomics	3.594	The complete chloroplast genome of Stauntonia chinensis and compared analysis revealed adaptive evolution of subfamily Lardizabaloideae species in China‍	九江大学药学院
	2020	BMC Genomics	3.501	Comparative chloroplast genomics of the genus Taxodium‍	江苏省中国科学院植物研究所

动植物基因组	2022	Horticulture Research	6.793	Genome sequencing and population resequencing provide insights into the genetic basis of domestication and diversity of vegetable soybean	浙江省农科院
	2021	The Plant Journal	6.417	Long-read genome assembly and genetic architecture of fruit shape in the bottle gourd	浙江省农业科学院蔬菜研究所
	2021	Molecular Ecology Resource	6.286	A high-quality genome assembly of the eggplant provides insights into the molecular basis of disease resistance and chlorogenic acid synthesis	广西农业科学院蔬菜研究所
	2021	Chemosphere	5.778	Integrated effects of Ulva prolifera bloom and decay on nutrients inventory and cycling in marginal sea of China	中国海洋大学
	2020	Genomics, Proteomics & Bioinformatics	7.051	The Wolfiporia cocos Genome and Transcriptome Shed Light on the Forma‐ tion of Its Edible and Medicinal Sclerotium	中国中医科学院中药研究所
	2020	Giga Science	5.993	Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family	中国农业科学院深圳农业基因组学研究所
	2020	Giga Science	5.993	The chromosome-level draft genome of Dalbergia odorifera	中国科学院热带林业研究所树木遗传育种国家重点实验室
	2020	Molecular Ecology	5.855	Chromosome‐level genome assembly for the largemouth bass Micropterus salmoides provides insights into adaptation to fresh and brackish water	中国科学院大学
	2020	iScience	4.447	The Chromosome-scale Genome of Melon Dissects Genetic Architecture of Important Agronomic Traits	浙江大学

表观遗传学	2022	Microbiome	14.65	Long-term efect of epigenetic modifcation in plant–microbe interactions: modifcation of DNA methylation induced by plant growth_x005fpromoting bacteria mediates promotion process	南京农业大学
	2022	Frontiers in Nutrition	6.576	Multi-Omics Landscape of DNA Methylation Regulates Browning in “Fuji” Apple	中国农业科学院
	2021	Frontiers in plant science	5.753	Genome-Wide DNA Methylation Analysis of Soybean Curled-Cotyledons Mutant and Functional Evaluation of a Homeodomain-Leucine Zipper (HD-Zip) I Gene GmHDZ20	南京农业大学
	2020	J Cell Physiol	5.546	CCL21/CCR7 interaction promotes EMT and enhances the stemness of OSCC via a JAK2/STAT3 signaling pathway	武汉大学口腔医学院
	2020	Journal of Immunology	4.886	‍Genome-Wide DNA Methylation and RNA Analysis Reveal Potential Mechanism of Resistance to Streptococcus agalactiae in GIFT Strain of Nile Tilapia (Oreochromis niloticus)	中国水产科学研究院长江水产研究所

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